Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 MIR4722-201ENST00000578292 60 ntBASIC19.93■□□□□ 0.78
SIN3AQ96ST3 NUDT4P2-201ENST00000578341 546 ntBASIC19.93■□□□□ 0.78
SIN3AQ96ST3 MIR5572-201ENST00000583188 137 ntBASIC19.93■□□□□ 0.78
SIN3AQ96ST3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 AL358781.1-202ENST00000321081 1360 ntBASIC19.93■□□□□ 0.78
SIN3AQ96ST3 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIN3AQ96ST3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 AC093826.1-201ENST00000508655 993 ntBASIC19.92■□□□□ 0.78
SIN3AQ96ST3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SIN3AQ96ST3 AC107918.4-201ENST00000641966 3141 ntBASIC19.91■□□□□ 0.78
SIN3AQ96ST3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 AL365181.1-201ENST00000564032 1828 ntBASIC19.91■□□□□ 0.78
SIN3AQ96ST3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 MIR4649-201ENST00000582839 64 ntBASIC19.91■□□□□ 0.78
SIN3AQ96ST3 MIR6858-201ENST00000620733 67 ntBASIC19.91■□□□□ 0.78
SIN3AQ96ST3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 AC024075.2-201ENST00000598112 1473 ntBASIC19.91■□□□□ 0.78
SIN3AQ96ST3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIN3AQ96ST3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 AC004837.1-201ENST00000446267 564 ntBASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PIGCP1-201ENST00000527583 895 ntBASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms