Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 OR2T32P-201ENST00000403423 963 ntBASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 DIS3L2P1-201ENST00000509197 559 ntBASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 AC018868.2-201ENST00000559655 1259 ntBASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 AC103810.4-201ENST00000578601 257 ntBASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 MIR4539-201ENST00000579784 60 ntBASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTF1AQ7RTS3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 TPM3P7-201ENST00000338274 732 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 RNF7-202ENST00000393000 805 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 ALMS1P1-201ENST00000428767 921 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 ATP5G1P7-201ENST00000444398 400 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 PARVG-208ENST00000466375 820 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 RN7SL487P-201ENST00000468140 344 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AC009132.1-201ENST00000565194 320 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 RN7SL827P-201ENST00000607480 288 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 U62317.4-201ENST00000609758 448 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 AC027601.5-201ENST00000624065 2482 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTF1AQ7RTS3 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 SRSF9P1-201ENST00000399149 530 ntBASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 MRPS16P3-201ENST00000415961 374 ntBASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 PRDX2P3-201ENST00000515779 586 ntBASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 RN7SL678P-201ENST00000579533 299 ntBASIC17.22■□□□□ 0.35
PTF1AQ7RTS3 AD000091.1-201ENST00000592379 287 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms