Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 KATNBL1P2-201ENST00000433311 835 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CDCA4P4-201ENST00000435216 680 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 LINC00115-201ENST00000473798 1317 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC093300.1-201ENST00000510368 1201 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 FAM90A12P-201ENST00000519497 2375 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 FAM90A24P-201ENST00000520792 2369 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 SORD2P-201ENST00000558556 1069 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC104506.1-201ENST00000609247 429 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 URAHP-205ENST00000610227 398 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC117503.4-201ENST00000623229 1418 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 AC139713.2-207ENST00000641556 1292 ntBASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTC1Q2NKJ3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 KRT8P30-201ENST00000432100 650 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC025594.1-201ENST00000469533 543 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 ALG1L7P-201ENST00000502317 768 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 MIR2278-201ENST00000516344 96 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 BAK1P2-201ENST00000532665 631 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 CR392039.1-201ENST00000623217 204 ntBASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms