Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
SSBP1Q04837 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.73□□□□□ -0.53
SSBP1Q04837 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 PISD-203ENST00000397500 2194 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 AC006144.1-201ENST00000424220 1600 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 C2orf27AP3-201ENST00000434123 579 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 AC244394.1-201ENST00000435000 1665 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 AL354989.2-201ENST00000435838 1540 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.73□□□□□ -0.53
SSBP1Q04837 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 DNM1P51-201ENST00000558149 522 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.73□□□□□ -0.53
SSBP1Q04837 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.73□□□□□ -0.53
SSBP1Q04837 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SSBP1Q04837 GNRHR2-203ENST00000581100 1187 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 WFDC1-204ENST00000613603 549 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 AL354718.3-201ENST00000616414 581 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 CR382287.1-201ENST00000623954 586 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 AL033527.5-201ENST00000641382 801 ntBASIC11.73□□□□□ -0.53
SSBP1Q04837 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SSBP1Q04837 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.73□□□□□ -0.53
SSBP1Q04837 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSBP1Q04837 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SSBP1Q04837 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 HNRNPLP1-201ENST00000421896 1501 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 E2F3P2-201ENST00000447755 1422 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms