Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 SNORA50C-201ENST00000408535 133 ntBASIC13.2□□□□□ -0.3
SKP1P63208 AC005722.1-201ENST00000431878 964 ntBASIC13.2□□□□□ -0.3
SKP1P63208 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.2□□□□□ -0.3
SKP1P63208 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.2□□□□□ -0.3
SKP1P63208 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.2□□□□□ -0.3
SKP1P63208 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 MIR3940-201ENST00000579148 102 ntBASIC13.2□□□□□ -0.3
SKP1P63208 AC012073.1-201ENST00000606114 1108 ntBASIC13.2□□□□□ -0.3
SKP1P63208 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.2□□□□□ -0.3
SKP1P63208 SNORA50.1-201ENST00000628590 135 ntBASIC13.2□□□□□ -0.3
SKP1P63208 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 AP001184.1-201ENST00000637936 376 ntBASIC13.2□□□□□ -0.3
SKP1P63208 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.2□□□□□ -0.3
SKP1P63208 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.2□□□□□ -0.3
SKP1P63208 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SKP1P63208 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.2□□□□□ -0.3
SKP1P63208 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 PDXDC2P-206ENST00000534700 1315 ntBASIC13.19□□□□□ -0.3
SKP1P63208 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 AGAP10P-201ENST00000454844 2418 ntBASIC13.19□□□□□ -0.3
SKP1P63208 SALL4P6-201ENST00000429385 1691 ntBASIC13.19□□□□□ -0.3
SKP1P63208 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.19□□□□□ -0.3
SKP1P63208 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.19□□□□□ -0.3
SKP1P63208 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.19□□□□□ -0.3
SKP1P63208 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.19□□□□□ -0.3
SKP1P63208 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.19□□□□□ -0.3
SKP1P63208 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.19□□□□□ -0.3
SKP1P63208 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.19□□□□□ -0.3
SKP1P63208 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.19□□□□□ -0.3
SKP1P63208 KRT8P2-201ENST00000556193 944 ntBASIC13.19□□□□□ -0.3
SKP1P63208 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 AL049840.2-201ENST00000602722 535 ntBASIC13.19□□□□□ -0.3
SKP1P63208 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.19□□□□□ -0.3
SKP1P63208 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.19□□□□□ -0.3
SKP1P63208 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms