Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VBP1P61758 AL391294.1-201ENST00000641352 4068 ntBASIC12.44□□□□□ -0.42
VBP1P61758 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VBP1P61758 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 CICP12-201ENST00000455801 843 ntBASIC12.44□□□□□ -0.42
VBP1P61758 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 AC005829.1-201ENST00000570002 483 ntBASIC12.44□□□□□ -0.42
VBP1P61758 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.44□□□□□ -0.42
VBP1P61758 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.43□□□□□ -0.42
VBP1P61758 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
VBP1P61758 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 AC103592.1-201ENST00000394513 664 ntBASIC12.43□□□□□ -0.42
VBP1P61758 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.43□□□□□ -0.42
VBP1P61758 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 MYCLP2-201ENST00000449268 967 ntBASIC12.43□□□□□ -0.42
VBP1P61758 AL035414.1-201ENST00000451327 857 ntBASIC12.43□□□□□ -0.42
VBP1P61758 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.43□□□□□ -0.42
VBP1P61758 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.43□□□□□ -0.42
VBP1P61758 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.43□□□□□ -0.42
VBP1P61758 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.43□□□□□ -0.42
VBP1P61758 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.43□□□□□ -0.42
VBP1P61758 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.43□□□□□ -0.42
VBP1P61758 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.43□□□□□ -0.42
VBP1P61758 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VBP1P61758 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.43□□□□□ -0.42
VBP1P61758 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VBP1P61758 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VBP1P61758 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms