Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 AC134407.3-201ENST00000624035 2139 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 DPM3-202ENST00000368399 517 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 AL391647.1-201ENST00000395664 511 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 AC005077.2-201ENST00000449786 690 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 AC104073.2-201ENST00000453737 312 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 BX284668.4-201ENST00000453917 508 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.25□□□□□ -0.45
SEC61A1P61619 ALG3P1-201ENST00000508806 1114 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC61A1P61619 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC61A1P61619 SORD2P-201ENST00000558556 1069 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 BX088702.1-201ENST00000610784 235 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 AC138649.2-201ENST00000615886 705 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 AL023803.2-201ENST00000620080 638 ntBASIC12.25□□□□□ -0.45
SEC61A1P61619 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.25□□□□□ -0.45
SEC61A1P61619 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC61A1P61619 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC61A1P61619 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 AC012531.1-201ENST00000562848 2680 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 PCDHB19P-202ENST00000625133 2914 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC61A1P61619 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC61A1P61619 AC010970.1-201ENST00000445125 1848 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC61A1P61619 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 TUBB8P8-201ENST00000458717 1058 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 RPL18P13-201ENST00000478088 569 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
SEC61A1P61619 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC61A1P61619 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 AC027369.3-201ENST00000530465 3707 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 AC013355.1-201ENST00000562625 723 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.24□□□□□ -0.45
SEC61A1P61619 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 AC005962.1-201ENST00000584100 773 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 AC060814.4-201ENST00000594169 2163 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 AL008718.2-201ENST00000609206 1313 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 AC027601.3-201ENST00000622907 509 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms