Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 AL031719.1-201ENST00000623365 2587 ntBASIC12.77□□□□□ -0.36
CLDN20P56880 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN20P56880 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN20P56880 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN20P56880 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN20P56880 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CLDN20P56880 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.77□□□□□ -0.36
CLDN20P56880 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
CLDN20P56880 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN20P56880 AC107375.1-201ENST00000564464 2231 ntBASIC12.77□□□□□ -0.36
CLDN20P56880 MARK2P16-201ENST00000605714 1723 ntBASIC12.77□□□□□ -0.36
CLDN20P56880 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CLDN20P56880 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 AC091046.1-201ENST00000331871 207 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 MIR557-201ENST00000385239 98 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CLDN20P56880 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 AL807761.2-201ENST00000422849 729 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 EEF1DP6-201ENST00000449232 372 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN20P56880 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN20P56880 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.77□□□□□ -0.37
CLDN20P56880 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 SIGLEC18P-201ENST00000602271 909 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 AL731571.1-201ENST00000617058 5428 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN20P56880 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CLDN20P56880 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN20P56880 AC131212.3-201ENST00000624087 4219 ntBASIC12.77□□□□□ -0.37
CLDN20P56880 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CLDN20P56880 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 AL627231.1-201ENST00000394467 1125 ntBASIC12.76□□□□□ -0.37
CLDN20P56880 HMGA1P1-201ENST00000415560 1062 ntBASIC12.76□□□□□ -0.37
CLDN20P56880 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.76□□□□□ -0.37
CLDN20P56880 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDN20P56880 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms