Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNB3P54284 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CACNB3P54284 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 SNORA57-201ENST00000383870 149 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 SNORD23-201ENST00000408876 110 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 AC010086.2-201ENST00000428616 226 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 KRT8P30-201ENST00000432100 650 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 RNU1-80P-201ENST00000459500 161 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 SRPK2P-201ENST00000523408 1100 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 OR4A49P-201ENST00000527050 632 ntBASIC16.21■□□□□ 0.19
CACNB3P54284 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CACNB3P54284 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNB3P54284 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CACNB3P54284 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNB3P54284 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNB3P54284 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CACNB3P54284 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CACNB3P54284 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.21■□□□□ 0.18
CACNB3P54284 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CACNB3P54284 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CACNB3P54284 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CACNB3P54284 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 AL137244.1-201ENST00000422931 865 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 AK2P2-201ENST00000439142 405 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 AC147876.1-201ENST00000504408 322 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 AC004801.1-201ENST00000549557 360 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 RN7SL134P-201ENST00000579756 303 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 MIR6816-201ENST00000620368 66 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 LILRP2-202ENST00000413572 1383 ntBASIC16.2■□□□□ 0.18
CACNB3P54284 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.2■□□□□ 0.18
CACNB3P54284 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.2■□□□□ 0.18
CACNB3P54284 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNB3P54284 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CACNB3P54284 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNB3P54284 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms