Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MMP13P45452 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MMP13P45452 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.46□□□□□ -0.09
MMP13P45452 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.46□□□□□ -0.1
MMP13P45452 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MMP13P45452 AC008132.1-202ENST00000342005 1389 ntBASIC14.46□□□□□ -0.1
MMP13P45452 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MMP13P45452 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MMP13P45452 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MMP13P45452 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
MMP13P45452 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 AC002350.2-201ENST00000623894 1828 ntBASIC14.45□□□□□ -0.1
MMP13P45452 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 RCC2P1-201ENST00000452257 1476 ntBASIC14.45□□□□□ -0.1
MMP13P45452 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 OR8T1P-201ENST00000421347 918 ntBASIC14.45□□□□□ -0.1
MMP13P45452 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 Z97180.1-201ENST00000445173 988 ntBASIC14.45□□□□□ -0.1
MMP13P45452 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.45□□□□□ -0.1
MMP13P45452 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 MEG3_2.1-201ENST00000611456 105 ntBASIC14.45□□□□□ -0.1
MMP13P45452 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.45□□□□□ -0.1
MMP13P45452 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 SALL4P6-201ENST00000429385 1691 ntBASIC14.45□□□□□ -0.1
MMP13P45452 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP13P45452 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MMP13P45452 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP13P45452 AL021155.1-201ENST00000438808 2637 ntBASIC14.45□□□□□ -0.1
MMP13P45452 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
MMP13P45452 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 AC131212.3-201ENST00000624087 4219 ntBASIC14.44□□□□□ -0.1
MMP13P45452 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.44□□□□□ -0.1
MMP13P45452 AC006335.1-201ENST00000445200 547 ntBASIC14.44□□□□□ -0.1
MMP13P45452 CHCHD2P2-201ENST00000503744 321 ntBASIC14.44□□□□□ -0.1
MMP13P45452 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.44□□□□□ -0.1
MMP13P45452 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
MMP13P45452 AL161670.2-201ENST00000557650 1227 ntBASIC14.44□□□□□ -0.1
MMP13P45452 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
MMP13P45452 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.44□□□□□ -0.1
MMP13P45452 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
MMP13P45452 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
MMP13P45452 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP13P45452 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP13P45452 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms