Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
MTHFRP42898 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 USP17L6P-201ENST00000382470 1197 ntBASIC14.47□□□□□ -0.09
MTHFRP42898 KRT19P4-201ENST00000443208 943 ntBASIC14.47□□□□□ -0.09
MTHFRP42898 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 AC079414.2-201ENST00000567157 1104 ntBASIC14.47□□□□□ -0.09
MTHFRP42898 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.47□□□□□ -0.09
MTHFRP42898 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.47□□□□□ -0.09
MTHFRP42898 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.47□□□□□ -0.09
MTHFRP42898 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.47□□□□□ -0.09
MTHFRP42898 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 AC008536.3-201ENST00000623282 1599 ntBASIC14.47□□□□□ -0.09
MTHFRP42898 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 LILRP2-202ENST00000413572 1383 ntBASIC14.47□□□□□ -0.09
MTHFRP42898 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MTHFRP42898 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.46□□□□□ -0.09
MTHFRP42898 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
MTHFRP42898 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 HLA-DMA-202ENST00000395303 1007 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 AL157823.1-201ENST00000403727 628 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 AC015818.1-201ENST00000451011 244 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.46□□□□□ -0.09
MTHFRP42898 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 RN7SL602P-201ENST00000578326 324 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 RN7SL524P-201ENST00000581152 300 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 RN7SL718P-201ENST00000581254 303 ntBASIC14.46□□□□□ -0.09
MTHFRP42898 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
MTHFRP42898 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
MTHFRP42898 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
MTHFRP42898 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.46□□□□□ -0.09
MTHFRP42898 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 AC126335.2-201ENST00000623362 4637 ntBASIC14.46□□□□□ -0.1
MTHFRP42898 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
MTHFRP42898 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MTHFRP42898 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.45□□□□□ -0.1
MTHFRP42898 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms