Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AL022328.3-201ENST00000607943 679 ntBASIC15.23■□□□□ 0.03
USP8P40818 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 NCLP1-201ENST00000445357 1963 ntBASIC15.23■□□□□ 0.03
USP8P40818 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 LINC01815-202ENST00000641468 1409 ntBASIC15.23■□□□□ 0.03
USP8P40818 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.22■□□□□ 0.03
USP8P40818 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
USP8P40818 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.22■□□□□ 0.03
USP8P40818 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.22■□□□□ 0.03
USP8P40818 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.22■□□□□ 0.03
USP8P40818 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.22■□□□□ 0.03
USP8P40818 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 BRD7P5-201ENST00000299197 1822 ntBASIC15.22■□□□□ 0.03
USP8P40818 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
USP8P40818 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP8P40818 AR-208ENST00000612452 10676 ntTSL 5 BASIC15.22■□□□□ 0.03
USP8P40818 AGAP12P-201ENST00000585227 2359 ntBASIC15.21■□□□□ 0.03
USP8P40818 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.21■□□□□ 0.03
USP8P40818 AL139158.3-201ENST00000641212 1562 ntBASIC15.21■□□□□ 0.03
USP8P40818 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.21■□□□□ 0.03
USP8P40818 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
USP8P40818 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.21■□□□□ 0.03
USP8P40818 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.21■□□□□ 0.03
USP8P40818 MARK2P5-201ENST00000507649 634 ntBASIC15.21■□□□□ 0.03
USP8P40818 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.21■□□□□ 0.03
USP8P40818 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 KRT18P8-201ENST00000581937 1246 ntBASIC15.21■□□□□ 0.03
USP8P40818 MIR3615-201ENST00000581999 87 ntBASIC15.21■□□□□ 0.03
USP8P40818 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 CR392039.2-201ENST00000623182 509 ntBASIC15.21■□□□□ 0.03
USP8P40818 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.21■□□□□ 0.03
USP8P40818 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
USP8P40818 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP8P40818 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.21■□□□□ 0.03
USP8P40818 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms