Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC17.21■□□□□ 0.35
COL15A1P39059 JPT2-214ENST00000569765 782 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.21■□□□□ 0.35
COL15A1P39059 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.21■□□□□ 0.35
COL15A1P39059 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.21■□□□□ 0.35
COL15A1P39059 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.21■□□□□ 0.35
COL15A1P39059 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COL15A1P39059 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
COL15A1P39059 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
COL15A1P39059 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL15A1P39059 AC072061.1-201ENST00000569710 2234 ntBASIC17.21■□□□□ 0.34
COL15A1P39059 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC17.2■□□□□ 0.34
COL15A1P39059 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COL15A1P39059 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 MED15P3-201ENST00000413613 326 ntBASIC17.2■□□□□ 0.34
COL15A1P39059 DNM1P46-202ENST00000415963 882 ntBASIC17.2■□□□□ 0.34
COL15A1P39059 GYG1-209ENST00000483267 801 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 AC011431.1-201ENST00000512971 230 ntBASIC17.2■□□□□ 0.34
COL15A1P39059 PIGCP1-201ENST00000527583 895 ntBASIC17.2■□□□□ 0.34
COL15A1P39059 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC17.2■□□□□ 0.34
COL15A1P39059 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC17.2■□□□□ 0.34
COL15A1P39059 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC17.2■□□□□ 0.34
COL15A1P39059 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC17.2■□□□□ 0.34
COL15A1P39059 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC17.2■□□□□ 0.34
COL15A1P39059 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.2■□□□□ 0.34
COL15A1P39059 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COL15A1P39059 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.2■□□□□ 0.34
COL15A1P39059 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.2■□□□□ 0.34
COL15A1P39059 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL15A1P39059 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL15A1P39059 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 RBM14-205ENST00000443702 732 ntTSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC17.19■□□□□ 0.34
COL15A1P39059 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 AP001462.1-201ENST00000594089 452 ntBASIC17.19■□□□□ 0.34
COL15A1P39059 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.19■□□□□ 0.34
COL15A1P39059 NCLP1-201ENST00000445357 1963 ntBASIC17.19■□□□□ 0.34
COL15A1P39059 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms