Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FDFT1P37268 AC073869.2-201ENST00000417338 1026 ntBASIC14.16□□□□□ -0.14
FDFT1P37268 AL008707.1-201ENST00000422498 534 ntBASIC14.16□□□□□ -0.14
FDFT1P37268 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.16□□□□□ -0.14
FDFT1P37268 COQ10BP2-201ENST00000513804 724 ntBASIC14.16□□□□□ -0.14
FDFT1P37268 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FDFT1P37268 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 AL033527.4-201ENST00000641026 673 ntBASIC14.16□□□□□ -0.14
FDFT1P37268 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 AC115284.2-201ENST00000624646 2054 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 AC040160.2-201ENST00000623816 1675 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 RCC2P5-201ENST00000492126 1487 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 PPP1R2P4-201ENST00000424051 595 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.15□□□□□ -0.14
FDFT1P37268 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.15□□□□□ -0.14
FDFT1P37268 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.15□□□□□ -0.14
FDFT1P37268 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 AC091804.1-201ENST00000486888 567 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.15□□□□□ -0.14
FDFT1P37268 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.15□□□□□ -0.14
FDFT1P37268 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.15□□□□□ -0.14
FDFT1P37268 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.15□□□□□ -0.14
FDFT1P37268 AC132825.4-202ENST00000578792 434 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 AL359881.2-201ENST00000602973 570 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 PCDHB18P-202ENST00000526308 3197 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FDFT1P37268 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 Z98257.2-202ENST00000641138 1548 ntBASIC14.15□□□□□ -0.14
FDFT1P37268 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
FDFT1P37268 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.15□□□□□ -0.14
FDFT1P37268 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.15□□□□□ -0.15
FDFT1P37268 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
FDFT1P37268 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms