Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
CD40P25942 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 AL627389.1-201ENST00000413508 1182 ntBASIC11.92□□□□□ -0.5
CD40P25942 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 AL157792.1-201ENST00000488281 530 ntBASIC11.92□□□□□ -0.5
CD40P25942 HNRNPA1P56-201ENST00000505767 954 ntBASIC11.92□□□□□ -0.5
CD40P25942 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 FOXN3-AS2-201ENST00000554071 1262 ntBASIC11.92□□□□□ -0.5
CD40P25942 MT2A-202ENST00000561491 581 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC11.92□□□□□ -0.5
CD40P25942 AC005777.1-201ENST00000588332 187 ntBASIC11.92□□□□□ -0.5
CD40P25942 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 NAMA-206ENST00000605377 509 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC11.92□□□□□ -0.5
CD40P25942 MIR8071-1-201ENST00000616769 65 ntBASIC11.92□□□□□ -0.5
CD40P25942 MIR8071-2-201ENST00000616772 65 ntBASIC11.92□□□□□ -0.5
CD40P25942 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
CD40P25942 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.92□□□□□ -0.5
CD40P25942 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.92□□□□□ -0.5
CD40P25942 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD40P25942 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 AC089987.1-201ENST00000551654 2209 ntBASIC11.91□□□□□ -0.5
CD40P25942 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CD40P25942 LINP1-201ENST00000417112 917 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 GULOP-201ENST00000454030 748 ntBASIC11.91□□□□□ -0.5
CD40P25942 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC11.91□□□□□ -0.5
CD40P25942 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC11.91□□□□□ -0.5
CD40P25942 KRT18P37-201ENST00000520711 1282 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms