Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
COL8A2P25067 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.72□□□□□ -0.53
COL8A2P25067 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 OR7E115P-201ENST00000382617 1024 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
COL8A2P25067 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC11.72□□□□□ -0.53
COL8A2P25067 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
COL8A2P25067 OR2W2P-201ENST00000406313 909 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.72□□□□□ -0.53
COL8A2P25067 RN7SL23P-201ENST00000484055 275 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 PPIA-208ENST00000489459 907 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 EEF1GP8-201ENST00000506566 1154 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 COQ10BP2-201ENST00000513804 724 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC11.72□□□□□ -0.53
COL8A2P25067 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC11.72□□□□□ -0.53
COL8A2P25067 AC012073.1-201ENST00000606114 1108 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 PPIA-210ENST00000620047 827 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 LINC00431-202ENST00000636375 159 ntBASIC11.72□□□□□ -0.53
COL8A2P25067 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
COL8A2P25067 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
COL8A2P25067 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.72□□□□□ -0.53
COL8A2P25067 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.71□□□□□ -0.53
COL8A2P25067 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms