Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC116345.2-201ENST00000512837 523 ntBASIC16.06■□□□□ 0.16
ATP2B1P20020 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.06■□□□□ 0.16
ATP2B1P20020 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP2B1P20020 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP2B1P20020 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATP2B1P20020 LINC01783-202ENST00000614408 828 ntBASIC16.06■□□□□ 0.16
ATP2B1P20020 BX284668.2-205ENST00000619677 828 ntBASIC16.06■□□□□ 0.16
ATP2B1P20020 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP2B1P20020 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2B1P20020 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 PPT1-213ENST00000641319 2388 ntBASIC16.06■□□□□ 0.16
ATP2B1P20020 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATP2B1P20020 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2B1P20020 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2B1P20020 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2B1P20020 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP2B1P20020 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2B1P20020 ELK2AP-201ENST00000392510 1007 ntBASIC16.05■□□□□ 0.16
ATP2B1P20020 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2B1P20020 POU5F1P2-201ENST00000521750 823 ntBASIC16.05■□□□□ 0.16
ATP2B1P20020 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.05■□□□□ 0.16
ATP2B1P20020 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.05■□□□□ 0.16
ATP2B1P20020 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2B1P20020 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AL139099.5-201ENST00000635274 300 ntBASIC16.05■□□□□ 0.16
ATP2B1P20020 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP2B1P20020 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP2B1P20020 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2B1P20020 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
ATP2B1P20020 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATP2B1P20020 AL445250.1-201ENST00000641671 2259 ntBASIC16.05■□□□□ 0.16
ATP2B1P20020 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATP2B1P20020 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 AC020658.7-201ENST00000624274 2442 ntBASIC16.04■□□□□ 0.16
ATP2B1P20020 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP2B1P20020 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 SLC25A15P3-201ENST00000505530 290 ntBASIC16.04■□□□□ 0.16
ATP2B1P20020 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP2B1P20020 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms