Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RFPL1O75677 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.95□□□□□ -0.18
RFPL1O75677 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.95□□□□□ -0.18
RFPL1O75677 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.95□□□□□ -0.18
RFPL1O75677 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.95□□□□□ -0.18
RFPL1O75677 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.95□□□□□ -0.18
RFPL1O75677 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.95□□□□□ -0.18
RFPL1O75677 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.95□□□□□ -0.18
RFPL1O75677 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.95□□□□□ -0.18
RFPL1O75677 SPCS2P2-201ENST00000603270 608 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 AP000346.4-201ENST00000614827 381 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 AL136295.7-201ENST00000619226 1200 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 AC079336.7-201ENST00000623428 1078 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 AL805961.1-203ENST00000641078 1258 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 AC004923.1-202ENST00000642106 209 ntBASIC13.95□□□□□ -0.18
RFPL1O75677 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RFPL1O75677 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.95□□□□□ -0.18
RFPL1O75677 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFPL1O75677 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 AC091046.1-201ENST00000331871 207 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 MIR33B-201ENST00000385104 96 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RFPL1O75677 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 AL021155.1-201ENST00000438808 2637 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 RNMTL1P1-201ENST00000454103 560 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RFPL1O75677 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 RPL18P13-201ENST00000478088 569 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 CHCHD2P2-201ENST00000503744 321 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 AL161670.2-201ENST00000557650 1227 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.94□□□□□ -0.18
RFPL1O75677 AC005324.6-201ENST00000587972 613 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 BNIP3P13-201ENST00000599968 566 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 U62317.3-201ENST00000608319 855 ntBASIC13.94□□□□□ -0.18
RFPL1O75677 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.94□□□□□ -0.18
RFPL1O75677 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.94□□□□□ -0.18
RFPL1O75677 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFPL1O75677 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms