Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 TUBB2BP1-201ENST00000404155 871 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 AC006987.1-201ENST00000413610 527 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 ATP5G2P4-201ENST00000442175 420 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.17□□□□□ -0.3
SCN2BO60939 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN2BO60939 RCC2P8-201ENST00000502779 1035 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 AC106794.1-201ENST00000506935 792 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 KRT8P1-201ENST00000557533 1207 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN2BO60939 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN2BO60939 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN2BO60939 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.17□□□□□ -0.3
SCN2BO60939 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 AL122018.1-201ENST00000446607 2310 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 CSPG4P11-201ENST00000560634 4910 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 NRADDP-202ENST00000641269 1585 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 AGGF1P10-201ENST00000635005 2191 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 GK-202ENST00000378941 458 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 AC126915.1-201ENST00000522847 1038 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCN2BO60939 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.16□□□□□ -0.3
SCN2BO60939 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.16□□□□□ -0.3
SCN2BO60939 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 AC004554.1-201ENST00000422830 1468 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 PI4KAP2-201ENST00000360806 2080 ntBASIC13.16□□□□□ -0.3
SCN2BO60939 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCN2BO60939 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms