Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AL591122.2-201ENST00000624125 1853 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MIR645-201ENST00000385283 94 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC098934.1-203ENST00000442868 1262 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MAGEA5-201ENST00000446757 942 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC234782.1-201ENST00000451950 919 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 FGFR3P5-201ENST00000564496 886 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RN7SL665P-201ENST00000578793 300 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RN7SL455P-201ENST00000580629 282 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC079336.7-201ENST00000623428 1078 ntBASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 PPT1-213ENST00000641319 2388 ntBASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 MIR557-201ENST00000385239 98 ntBASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 AL627231.1-201ENST00000394467 1125 ntBASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 PPP1R2P4-201ENST00000424051 595 ntBASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 RPL8P2-201ENST00000430538 502 ntBASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PARPBPQ9NWS1 RPL18AP8-201ENST00000486071 528 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms