Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC005722.1-201ENST00000431878 964 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 NRADDP-201ENST00000437305 691 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 GULOP-201ENST00000454030 748 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 IGHEP1-201ENST00000521393 651 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 AC023968.2-201ENST00000560593 1049 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 MIR8071-1-201ENST00000616769 65 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 MIR8071-2-201ENST00000616772 65 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 RCC2P1-201ENST00000452257 1476 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 NAV1-210ENST00000593583 726 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AC026336.4-201ENST00000624565 1050 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AL139424.3-202ENST00000641619 917 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 SALL4P6-201ENST00000429385 1691 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AL359219.1-201ENST00000556311 934 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AC027139.1-201ENST00000565286 951 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 URAHP-205ENST00000610227 398 ntBASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SYNGAP1Q96PV0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms