Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 OR4C3-202ENST00000611380 597 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC130469.2-201ENST00000625112 1092 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC023157.1-201ENST00000453713 402 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 RBP5-202ENST00000542370 564 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 RN7SL732P-201ENST00000581157 300 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC108673.2-201ENST00000608909 565 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC087893.1-201ENST00000612818 664 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC092471.1-202ENST00000637160 999 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 TUBB8P5-201ENST00000445286 1351 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC244154.1-201ENST00000620148 1555 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC007322.2-201ENST00000414540 605 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 RPL19P20-201ENST00000415648 591 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 HLA-DQB3-203ENST00000425319 356 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 RPL7AP53-201ENST00000468834 793 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SNORA74.2-201ENST00000516496 180 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 PRKN-210ENST00000612540 603 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 PRADC1P1-201ENST00000412317 525 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 OR10AA1P-201ENST00000417823 937 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 PTS-204ENST00000525803 625 ntTSL 3 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 OR7E126P-201ENST00000526217 888 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 AC007728.3-201ENST00000602304 746 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 SNORA50C-201ENST00000408535 133 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 ALG1L14P-201ENST00000514230 434 ntBASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ALMS1Q8TCU4 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms