Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL133466.1-201ENST00000447582 150 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 HLA-J-204ENST00000495278 958 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL136295.7-201ENST00000619226 1200 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 RPL13AP3-202ENST00000494676 1473 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 AL139158.3-201ENST00000641212 1562 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 ABCD1P2-201ENST00000429313 1601 ntBASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SEMA6DQ8NFY4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 RN7SL163P-201ENST00000583100 276 ntBASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 BNIP3P13-201ENST00000599968 566 ntBASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SEMA6DQ8NFY4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms