Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 PRDX2P3-201ENST00000515779 586 ntBASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 PCDHA5-203ENST00000614258 4248 ntBASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 AC018442.1-201ENST00000421439 2061 ntBASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CCDC168Q8NDH2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 PGAM1P10-201ENST00000402426 761 ntBASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 PRDX3P2-201ENST00000447051 611 ntBASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 CAP2-207ENST00000493172 861 ntTSL 2 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 FOS-205ENST00000555242 629 ntTSL 2 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 AC005332.2-201ENST00000590010 930 ntBASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 MIR6871-201ENST00000613433 56 ntBASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CCDC168Q8NDH2 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 AC139749.1-202ENST00000617529 3139 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 IL6RP1-201ENST00000417848 1273 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 AC067942.2-201ENST00000506227 1268 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 AACSP1-202ENST00000521412 1095 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 ELOBP2-201ENST00000526184 355 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 MTHFR-210ENST00000641407 2387 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 AC073869.1-201ENST00000415574 2762 ntBASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CA6-205ENST00000480186 1493 ntTSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CCDC168Q8NDH2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms