Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM48Q8IWZ4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AL805961.2-201ENST00000642139 4817 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 LINC00265-2P-201ENST00000413372 782 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 GUSBP10-201ENST00000417412 665 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AC018638.5-201ENST00000450885 754 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 GRPEL2P1-201ENST00000453145 339 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 KLF17P1-201ENST00000547105 1126 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 MIR4722-201ENST00000578292 60 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 MIR2392-201ENST00000584881 84 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AC087045.2-201ENST00000606279 1003 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 AC107464.3-201ENST00000609172 737 ntBASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM48Q8IWZ4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 AC068760.1-201ENST00000493579 1953 ntBASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM48Q8IWZ4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms