Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 POM121L10P-201ENST00000436994 1285 ntBASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AL035252.4-201ENST00000624174 288 ntBASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 FAM90A7P-201ENST00000382628 1395 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 FAM90A23P-201ENST00000400136 1395 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 VDAC1P1-201ENST00000439229 848 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GPR53P-205ENST00000457298 1084 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RPSAP36-202ENST00000494591 1261 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GOLGA2P8-201ENST00000505201 779 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AL023803.2-201ENST00000620080 638 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 LINC00638-201ENST00000555578 2518 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms