Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC018638.5-201ENST00000450885 754 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC145285.5-201ENST00000562217 361 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC009474.1-201ENST00000455096 1565 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 RCC2P1-201ENST00000452257 1476 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 AC061965.1-201ENST00000560524 1465 ntBASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TTC39BQ5VTQ0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AP000356.3-201ENST00000382243 753 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 ERP29P1-201ENST00000442902 706 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 FGFR3P1-201ENST00000449999 601 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC009145.4-201ENST00000625119 1294 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 AC006372.4-201ENST00000624122 1543 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 KRT8P43-201ENST00000406052 1458 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC39BQ5VTQ0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AGAP12P-201ENST00000585227 2359 ntBASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms