Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 ACTBP14-201ENST00000411655 1089 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 AC092638.2-201ENST00000441105 947 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 AC079112.1-201ENST00000454972 939 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 MIR8071-1-201ENST00000616769 65 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 MIR8071-2-201ENST00000616772 65 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 AC011491.1-203ENST00000637688 543 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.11■□□□□ 0.01
NCKAP1LP55160 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC024075.2-201ENST00000598112 1473 ntBASIC15.1■□□□□ 0.01
NCKAP1LP55160 PTENP1-202ENST00000532280 3996 ntBASIC15.1■□□□□ 0.01
NCKAP1LP55160 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC079250.1-201ENST00000456046 531 ntBASIC15.1■□□□□ 0.01
NCKAP1LP55160 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.1■□□□□ 0.01
NCKAP1LP55160 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1LP55160 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1LP55160 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1LP55160 OR7E115P-201ENST00000382617 1024 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms