Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 IGHV1-12-201ENST00000518307 205 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AL132994.1-201ENST00000554098 400 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 NUDT4P2-201ENST00000578341 546 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC132825.4-202ENST00000578792 434 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RN7SL357P-201ENST00000581065 298 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 RN7SL470P-201ENST00000583069 259 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AP005264.5-201ENST00000590066 467 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 AP000322.3-201ENST00000608665 388 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 MIR6858-201ENST00000620733 67 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC005014.1-201ENST00000432006 2976 ntBASIC14.73□□□□□ -0.05
CACNA2D1P54289 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 RPL17P11-201ENST00000417593 544 ntBASIC14.72□□□□□ -0.05
CACNA2D1P54289 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 AL049840.2-201ENST00000602722 535 ntBASIC14.72□□□□□ -0.05
CACNA2D1P54289 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.72□□□□□ -0.05
CACNA2D1P54289 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CACNA2D1P54289 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms