Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.85□□□□□ -0.03
BRCA2P51587 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BRCA2P51587 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.85□□□□□ -0.03
BRCA2P51587 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BRCA2P51587 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
BRCA2P51587 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC14.85□□□□□ -0.03
BRCA2P51587 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC14.85□□□□□ -0.03
BRCA2P51587 MIR6749-201ENST00000617008 69 ntBASIC14.85□□□□□ -0.03
BRCA2P51587 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRCA2P51587 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 RN7SKP255-201ENST00000363442 313 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 RN7SKP203-201ENST00000363618 332 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 RN7SKP71-201ENST00000364558 318 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 7SK.1-201ENST00000365328 331 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 EEF1GP3-201ENST00000421044 1288 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC14.84□□□□□ -0.03
BRCA2P51587 SSR3-202ENST00000463503 596 ntTSL 4 BASIC14.84□□□□□ -0.03
BRCA2P51587 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BRCA2P51587 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 AL133517.1-201ENST00000413412 748 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 AC108082.1-201ENST00000510857 331 ntBASIC14.84□□□□□ -0.03
BRCA2P51587 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.84□□□□□ -0.03
BRCA2P51587 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC14.84□□□□□ -0.03
BRCA2P51587 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
BRCA2P51587 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BRCA2P51587 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCA2P51587 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
BRCA2P51587 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCA2P51587 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BRCA2P51587 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
BRCA2P51587 MESTP4-201ENST00000412333 1204 ntBASIC14.83□□□□□ -0.03
BRCA2P51587 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
BRCA2P51587 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
BRCA2P51587 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCA2P51587 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCA2P51587 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.83□□□□□ -0.03
BRCA2P51587 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BRCA2P51587 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.83□□□□□ -0.04
BRCA2P51587 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCA2P51587 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCA2P51587 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
BRCA2P51587 RN7SL238P-201ENST00000613832 290 ntBASIC14.83□□□□□ -0.04
BRCA2P51587 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC14.83□□□□□ -0.04
BRCA2P51587 RN7SL106P-201ENST00000618104 290 ntBASIC14.83□□□□□ -0.04
BRCA2P51587 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCA2P51587 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCA2P51587 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCA2P51587 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCA2P51587 SNORD23-201ENST00000408876 110 ntBASIC14.83□□□□□ -0.04
BRCA2P51587 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCA2P51587 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC14.83□□□□□ -0.04
BRCA2P51587 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCA2P51587 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCA2P51587 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCA2P51587 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCA2P51587 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCA2P51587 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.82□□□□□ -0.04
BRCA2P51587 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCA2P51587 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCA2P51587 KRT8P24-201ENST00000560290 1559 ntBASIC14.82□□□□□ -0.04
BRCA2P51587 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCA2P51587 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms