Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.18□□□□□ -0.14
FDFT1P37268 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 RPS2P32-201ENST00000439199 892 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.18□□□□□ -0.14
FDFT1P37268 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.18□□□□□ -0.14
FDFT1P37268 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.18□□□□□ -0.14
FDFT1P37268 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FDFT1P37268 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 AL133467.4-201ENST00000602953 725 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 AC239800.4-201ENST00000603712 296 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 AC100757.4-201ENST00000626934 759 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 AC015909.3-201ENST00000572855 1794 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 AC008040.5-201ENST00000599781 1781 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FDFT1P37268 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 GK-202ENST00000378941 458 ntTSL 3 BASIC14.17□□□□□ -0.14
FDFT1P37268 MIR1908-201ENST00000410394 80 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 LINC00265-2P-201ENST00000413372 782 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.17□□□□□ -0.14
FDFT1P37268 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 AC005722.1-201ENST00000431878 964 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.17□□□□□ -0.14
FDFT1P37268 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.17□□□□□ -0.14
FDFT1P37268 AC090857.1-201ENST00000527400 390 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.17□□□□□ -0.14
FDFT1P37268 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.17□□□□□ -0.14
FDFT1P37268 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
FDFT1P37268 AL118558.3-201ENST00000607414 1079 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
FDFT1P37268 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 PCDHA6-201ENST00000378126 3267 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 TBC1D27-202ENST00000424239 1573 ntBASIC14.17□□□□□ -0.14
FDFT1P37268 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FDFT1P37268 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.17□□□□□ -0.14
FDFT1P37268 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FDFT1P37268 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.16□□□□□ -0.14
FDFT1P37268 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FDFT1P37268 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.16□□□□□ -0.14
FDFT1P37268 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.16□□□□□ -0.14
FDFT1P37268 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms