Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 B9D1-206ENST00000461069 923 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6P35125 AF186996.6-201ENST00000485294 149 ntBASIC18.2■□□□□ 0.5
USP6P35125 AC026412.1-206ENST00000502273 206 ntBASIC18.2■□□□□ 0.5
USP6P35125 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC18.2■□□□□ 0.5
USP6P35125 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC18.2■□□□□ 0.5
USP6P35125 AL137028.2-201ENST00000614601 256 ntBASIC18.2■□□□□ 0.5
USP6P35125 AC004466.2-201ENST00000614749 516 ntBASIC18.2■□□□□ 0.5
USP6P35125 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
USP6P35125 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6P35125 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
USP6P35125 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC18.19■□□□□ 0.5
USP6P35125 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 EGLN3-205ENST00000547327 2849 ntBASIC18.19■□□□□ 0.5
USP6P35125 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6P35125 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6P35125 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 AC024475.2-201ENST00000312173 879 ntBASIC18.19■□□□□ 0.5
USP6P35125 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 ASS1P1-201ENST00000402854 1237 ntBASIC18.19■□□□□ 0.5
USP6P35125 AC114781.1-201ENST00000450559 1028 ntBASIC18.19■□□□□ 0.5
USP6P35125 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC18.19■□□□□ 0.5
USP6P35125 AC104115.1-201ENST00000484005 623 ntBASIC18.19■□□□□ 0.5
USP6P35125 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC18.19■□□□□ 0.5
USP6P35125 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC18.19■□□□□ 0.5
USP6P35125 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC18.19■□□□□ 0.5
USP6P35125 IFNL3P1-201ENST00000595082 501 ntBASIC18.19■□□□□ 0.5
USP6P35125 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC18.19■□□□□ 0.5
USP6P35125 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6P35125 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
USP6P35125 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC18.18■□□□□ 0.5
USP6P35125 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC18.18■□□□□ 0.5
USP6P35125 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USP6P35125 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 SNORD88B-201ENST00000408454 91 ntBASIC18.18■□□□□ 0.5
USP6P35125 AC010900.1-201ENST00000449849 1296 ntBASIC18.18■□□□□ 0.5
USP6P35125 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC18.18■□□□□ 0.5
USP6P35125 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 LINC00643-207ENST00000637212 734 ntBASIC18.18■□□□□ 0.5
USP6P35125 AC023908.3-201ENST00000564211 3047 ntBASIC18.18■□□□□ 0.5
USP6P35125 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 TUBB8P5-201ENST00000445286 1351 ntBASIC18.18■□□□□ 0.5
USP6P35125 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP6P35125 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6P35125 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6P35125 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms