Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
COL8A2P25067 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 NME4-203ENST00000397722 1232 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 RPL3P2-204ENST00000413027 1203 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 RPL35P9-201ENST00000446059 350 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC11.74□□□□□ -0.53
COL8A2P25067 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 LINC00634-202ENST00000505157 222 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 IGHV1-12-201ENST00000518307 205 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 NT5C-204ENST00000578337 582 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 AC025183.3-201ENST00000623526 1482 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
COL8A2P25067 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 MIR1307-201ENST00000408840 149 ntBASIC11.73□□□□□ -0.53
COL8A2P25067 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC11.73□□□□□ -0.53
COL8A2P25067 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 RN7SL818P-201ENST00000485099 259 ntBASIC11.73□□□□□ -0.53
COL8A2P25067 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
COL8A2P25067 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC11.73□□□□□ -0.53
COL8A2P25067 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC11.73□□□□□ -0.53
COL8A2P25067 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
COL8A2P25067 AL049840.2-201ENST00000602722 535 ntBASIC11.73□□□□□ -0.53
COL8A2P25067 RN7SL725P-201ENST00000606439 259 ntBASIC11.73□□□□□ -0.53
COL8A2P25067 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
COL8A2P25067 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
COL8A2P25067 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms