Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 MIR557-201ENST00000385239 98 ntBASIC14.37□□□□□ -0.11
CD48P09326 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 EEF1DP2-201ENST00000433698 843 ntBASIC14.37□□□□□ -0.11
CD48P09326 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 AC006335.1-201ENST00000445200 547 ntBASIC14.37□□□□□ -0.11
CD48P09326 AC007279.1-201ENST00000448547 837 ntBASIC14.37□□□□□ -0.11
CD48P09326 NUP210P1-202ENST00000504322 710 ntBASIC14.37□□□□□ -0.11
CD48P09326 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
CD48P09326 RTN3P1-201ENST00000536295 711 ntBASIC14.37□□□□□ -0.11
CD48P09326 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.37□□□□□ -0.11
CD48P09326 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 AC242376.1-201ENST00000559033 726 ntBASIC14.37□□□□□ -0.11
CD48P09326 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.37□□□□□ -0.11
CD48P09326 MIR3677-201ENST00000578964 60 ntBASIC14.37□□□□□ -0.11
CD48P09326 MIR3940-201ENST00000579148 102 ntBASIC14.37□□□□□ -0.11
CD48P09326 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 AC102953.2-201ENST00000609755 3026 ntBASIC14.37□□□□□ -0.11
CD48P09326 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.37□□□□□ -0.11
CD48P09326 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 AL583805.1-201ENST00000391389 531 ntBASIC14.36□□□□□ -0.11
CD48P09326 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.36□□□□□ -0.11
CD48P09326 RPL3P2-204ENST00000413027 1203 ntBASIC14.36□□□□□ -0.11
CD48P09326 LINC00265-2P-201ENST00000413372 782 ntBASIC14.36□□□□□ -0.11
CD48P09326 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 CALR4P-201ENST00000431943 946 ntBASIC14.36□□□□□ -0.11
CD48P09326 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.36□□□□□ -0.11
CD48P09326 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.36□□□□□ -0.11
CD48P09326 DUTP3-201ENST00000450025 415 ntBASIC14.36□□□□□ -0.11
CD48P09326 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 RPL18AP8-201ENST00000486071 528 ntBASIC14.36□□□□□ -0.11
CD48P09326 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.36□□□□□ -0.11
CD48P09326 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.36□□□□□ -0.11
CD48P09326 AC132825.4-202ENST00000578792 434 ntBASIC14.36□□□□□ -0.11
CD48P09326 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CD48P09326 AC007326.1-201ENST00000604539 458 ntBASIC14.36□□□□□ -0.11
CD48P09326 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 BEND3P3-201ENST00000611030 2440 ntBASIC14.36□□□□□ -0.11
CD48P09326 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CD48P09326 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 AC126335.2-201ENST00000623362 4637 ntBASIC14.36□□□□□ -0.11
CD48P09326 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 PCDHB18P-202ENST00000526308 3197 ntBASIC14.36□□□□□ -0.11
CD48P09326 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.36□□□□□ -0.11
CD48P09326 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD48P09326 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD48P09326 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms