Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
HLA-AP01891 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 AP006294.1-201ENST00000415407 339 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 POM121L8P-201ENST00000417732 1281 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 POM121L9P-203ENST00000441984 1285 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 RN7SL752P-201ENST00000463779 287 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 RN7SL692P-201ENST00000464677 288 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.78□□□□□ -0.52
HLA-AP01891 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AL512310.5-201ENST00000551999 515 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.78□□□□□ -0.52
HLA-AP01891 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
HLA-AP01891 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 AC027307.3-201ENST00000594262 1100 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC005252.2-201ENST00000624630 1141 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC134407.3-201ENST00000624035 2139 ntBASIC11.78□□□□□ -0.52
HLA-AP01891 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-AP01891 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-AP01891 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-AP01891 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.77□□□□□ -0.52
HLA-AP01891 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.77□□□□□ -0.52
HLA-AP01891 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
HLA-AP01891 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
HLA-AP01891 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
HLA-AP01891 LAP3P2-201ENST00000454686 1454 ntBASIC11.77□□□□□ -0.52
HLA-AP01891 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
HLA-AP01891 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.77□□□□□ -0.52
HLA-AP01891 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-AP01891 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.77□□□□□ -0.52
HLA-AP01891 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-AP01891 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.53
HLA-AP01891 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
HLA-AP01891 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-AP01891 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-AP01891 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HLA-AP01891 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-AP01891 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-AP01891 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.77□□□□□ -0.53
HLA-AP01891 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms