Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC016397.2-201ENST00000624848 1985 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.77□□□□□ -0.36
LRFN1Q9P244 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRFN1Q9P244 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LRFN1Q9P244 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 EEF1GP8-201ENST00000506566 1154 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AL118522.1-201ENST00000611368 560 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 LINC00431-202ENST00000636375 159 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 AL139424.3-202ENST00000641619 917 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC090643.2-201ENST00000623442 2029 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 AC015909.5-201ENST00000624336 2266 ntBASIC12.77□□□□□ -0.37
LRFN1Q9P244 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.77□□□□□ -0.37
LRFN1Q9P244 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRFN1Q9P244 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.76□□□□□ -0.37
LRFN1Q9P244 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LRFN1Q9P244 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.76□□□□□ -0.37
LRFN1Q9P244 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.76□□□□□ -0.37
LRFN1Q9P244 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LRFN1Q9P244 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRFN1Q9P244 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms