Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AL353770.1-201ENST00000614915 403 ntBASIC14.37□□□□□ -0.11
SCG3Q8WXD2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 SHMT1P1-201ENST00000419974 1312 ntBASIC14.37□□□□□ -0.11
SCG3Q8WXD2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC239868.1-201ENST00000369385 493 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 HINT2P1-201ENST00000419438 481 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 ISCA2P1-201ENST00000425548 448 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AK2P2-201ENST00000439142 405 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 FTLP1-201ENST00000449155 526 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AL731571.1-201ENST00000617058 5428 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC007952.5-201ENST00000572818 1486 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AC144522.1-201ENST00000625111 1658 ntBASIC14.36□□□□□ -0.11
SCG3Q8WXD2 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SCG3Q8WXD2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AL512310.5-201ENST00000551999 515 ntBASIC14.35□□□□□ -0.11
SCG3Q8WXD2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 RN7SL574P-201ENST00000581512 297 ntBASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AC020922.3-201ENST00000595064 547 ntBASIC14.35□□□□□ -0.11
SCG3Q8WXD2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SCG3Q8WXD2 AC079336.7-201ENST00000623428 1078 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms