Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 Z98259.2-201ENST00000641583 609 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AL590824.1-201ENST00000403828 1349 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AGGF1P10-201ENST00000635005 2191 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AL358781.1-202ENST00000321081 1360 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 CES1P1-201ENST00000421606 1704 ntBASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 AC002350.2-201ENST00000623894 1828 ntBASIC11.77□□□□□ -0.52
RTN4IP1Q8WWV3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 BTBD6P1-201ENST00000412176 1267 ntBASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 KLF2P1-201ENST00000447438 1042 ntBASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 AC104758.3-203ENST00000562938 2123 ntBASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RTN4IP1Q8WWV3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AL645937.6-201ENST00000641122 3727 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 REXO1L6P-201ENST00000603433 1515 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms