Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 TNRC18P2-201ENST00000417666 2714 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 GGT8P-201ENST00000418938 532 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AC098934.2-202ENST00000438944 1033 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AC133548.2-202ENST00000562267 148 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 AC020917.4-201ENST00000623994 1999 ntBASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC17.6■□□□□ 0.41
COL22A1Q8NFW1 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AL662907.1-201ENST00000622988 1360 ntBASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AL132656.1-201ENST00000452173 490 ntBASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC069181.1-201ENST00000498256 554 ntBASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 snoZ6.3-201ENST00000583496 76 ntBASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC105105.4-201ENST00000610389 713 ntBASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL22A1Q8NFW1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AL357054.1-201ENST00000407035 1227 ntBASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AC006001.3-205ENST00000428370 579 ntBASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 RPSAP67-201ENST00000584105 862 ntBASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 KRT18P40-201ENST00000599859 1571 ntBASIC17.58■□□□□ 0.41
COL22A1Q8NFW1 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 AC109326.1-201ENST00000624705 1321 ntBASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 LDHAL6FP-201ENST00000405916 1082 ntBASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 DDTP1-201ENST00000443589 383 ntBASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 OR5BA1P-201ENST00000529722 982 ntBASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
COL22A1Q8NFW1 ALOX15P2-201ENST00000340858 1897 ntBASIC17.57■□□□□ 0.4
COL22A1Q8NFW1 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.57■□□□□ 0.4
COL22A1Q8NFW1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL22A1Q8NFW1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL22A1Q8NFW1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL22A1Q8NFW1 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms