Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AL138709.1-201ENST00000614840 1693 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 MSTO2P-201ENST00000314835 1709 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AL132655.2-201ENST00000596276 594 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 LINC02084-201ENST00000606069 1096 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 AC134312.5-201ENST00000568031 1313 ntBASIC12.07□□□□□ -0.48
BEST4Q8NFU0 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 OR2I1P-208ENST00000641137 4948 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AL359510.2-201ENST00000624958 2249 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 BAATP1-201ENST00000412284 1225 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AC012441.1-201ENST00000446669 685 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SPTLC1P1-201ENST00000447199 261 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ELK1P1-201ENST00000485699 580 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 CHCHD2P3-201ENST00000603038 451 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms