Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AC000077.1-201ENST00000420012 953 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AC092865.2-201ENST00000439409 971 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AC005077.3-201ENST00000449614 213 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 RN7SL440P-201ENST00000577855 343 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 BX322562.1-201ENST00000617004 561 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CR392039.1-201ENST00000623217 204 ntBASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 FMO6P-201ENST00000236166 1620 ntBASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 ASS1P1-201ENST00000402854 1237 ntBASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AC010900.1-201ENST00000449849 1296 ntBASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AP001462.1-201ENST00000594089 452 ntBASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms