Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HNRNPA1P11-201ENST00000580106 956 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AL137028.2-201ENST00000614601 256 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AL450487.2-201ENST00000615934 407 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 TBC1D3P1-201ENST00000590047 1693 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 AC097474.1-201ENST00000506481 1371 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 LINC00552-201ENST00000625151 2579 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 CA5BP1-205ENST00000435806 1064 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 SLC25A15P1-201ENST00000456738 342 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 ALDOAP1-201ENST00000491506 1078 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 AC063924.1-201ENST00000546680 673 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 NAT9-204ENST00000578822 839 ntTSL 3 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 KRT18P8-201ENST00000581937 1246 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 AC134878.2-201ENST00000620700 1265 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RC3H1Q5TC82 AC002350.2-201ENST00000623894 1828 ntBASIC17.03■□□□□ 0.32
RC3H1Q5TC82 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 CXXC1P1-202ENST00000489409 1212 ntBASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AL450346.2-201ENST00000495602 1024 ntBASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 TPST2P1-201ENST00000564073 1102 ntBASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 MIR4526-201ENST00000583168 87 ntBASIC17.02■□□□□ 0.32
RC3H1Q5TC82 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RC3H1Q5TC82 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RC3H1Q5TC82 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms