Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H3F3AP84243 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 PYY2-201ENST00000315776 282 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC092573.1-201ENST00000433054 884 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.43□□□□□ -0.42
H3F3AP84243 GRPEL2P1-201ENST00000453145 339 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 CHCHD2P9-201ENST00000461726 456 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.43□□□□□ -0.42
H3F3AP84243 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
H3F3AP84243 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC138701.2-201ENST00000553634 226 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC138894.2-201ENST00000602838 371 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC103691.2-201ENST00000618824 433 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 AC091769.1-201ENST00000619576 568 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 AC027612.1-201ENST00000445234 2395 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 AGAP12P-201ENST00000585227 2359 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.43□□□□□ -0.42
H3F3AP84243 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.43□□□□□ -0.42
H3F3AP84243 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3F3AP84243 AC245140.2-201ENST00000624054 1939 ntBASIC12.43□□□□□ -0.42
H3F3AP84243 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AC020763.3-201ENST00000625095 2904 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AC105206.1-202ENST00000314927 2368 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 ODCP-201ENST00000459650 1639 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.42□□□□□ -0.42
H3F3AP84243 HLA-DMA-203ENST00000395305 777 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 ERP29P1-201ENST00000442902 706 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 MAGEA5-201ENST00000446757 942 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 EEF1DP6-201ENST00000449232 372 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 RN7SL767P-201ENST00000493013 295 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms