Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.07□□□□□ -0.48
SNU13P55769 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SNU13P55769 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.07□□□□□ -0.48
SNU13P55769 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 POM121L14P-201ENST00000406100 1558 ntBASIC12.07□□□□□ -0.48
SNU13P55769 HMGA1P1-201ENST00000415560 1062 ntBASIC12.07□□□□□ -0.48
SNU13P55769 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.07□□□□□ -0.48
SNU13P55769 OR2R1P-201ENST00000441404 914 ntBASIC12.07□□□□□ -0.48
SNU13P55769 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 RPL18P13-201ENST00000478088 569 ntBASIC12.07□□□□□ -0.48
SNU13P55769 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
SNU13P55769 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 AC140658.4-201ENST00000561990 352 ntBASIC12.07□□□□□ -0.48
SNU13P55769 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.07□□□□□ -0.48
SNU13P55769 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 MIR4259-201ENST00000584466 101 ntBASIC12.07□□□□□ -0.48
SNU13P55769 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.07□□□□□ -0.48
SNU13P55769 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 AC090386.2-201ENST00000623010 1039 ntBASIC12.07□□□□□ -0.48
SNU13P55769 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 AP000437.1-201ENST00000624057 2085 ntBASIC12.07□□□□□ -0.48
SNU13P55769 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
SNU13P55769 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 AL590824.1-201ENST00000403828 1349 ntBASIC12.07□□□□□ -0.48
SNU13P55769 AC063926.2-201ENST00000623766 1308 ntBASIC12.07□□□□□ -0.48
SNU13P55769 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.07□□□□□ -0.48
SNU13P55769 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SNU13P55769 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SNU13P55769 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SNU13P55769 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SNU13P55769 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.06□□□□□ -0.48
SNU13P55769 FAM58BP-201ENST00000439056 645 ntBASIC12.06□□□□□ -0.48
SNU13P55769 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 HSPB1P2-201ENST00000448722 546 ntBASIC12.06□□□□□ -0.48
SNU13P55769 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SNU13P55769 RPSAP36-202ENST00000494591 1261 ntBASIC12.06□□□□□ -0.48
SNU13P55769 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SNU13P55769 AC119751.2-201ENST00000504529 210 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms