Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 AC110048.1-201ENST00000604293 2157 ntBASIC12.29□□□□□ -0.44
CCR9P51686 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 AL645937.6-201ENST00000641122 3727 ntBASIC12.28□□□□□ -0.44
CCR9P51686 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCR9P51686 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCR9P51686 BOLA2P3-201ENST00000404566 256 ntBASIC12.28□□□□□ -0.44
CCR9P51686 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.28□□□□□ -0.44
CCR9P51686 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.28□□□□□ -0.44
CCR9P51686 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.28□□□□□ -0.44
CCR9P51686 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.28□□□□□ -0.44
CCR9P51686 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.28□□□□□ -0.44
CCR9P51686 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.28□□□□□ -0.44
CCR9P51686 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 IGHV3-72-202ENST00000621503 303 ntBASIC12.28□□□□□ -0.44
CCR9P51686 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCR9P51686 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.28□□□□□ -0.44
CCR9P51686 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.28□□□□□ -0.44
CCR9P51686 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCR9P51686 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CCR9P51686 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.27□□□□□ -0.44
CCR9P51686 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.27□□□□□ -0.44
CCR9P51686 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.27□□□□□ -0.44
CCR9P51686 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCR9P51686 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms