Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC18.22■□□□□ 0.51
USP6P35125 STK25-235ENST00000543554 2556 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 AC002350.2-201ENST00000623894 1828 ntBASIC18.22■□□□□ 0.51
USP6P35125 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
USP6P35125 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 AL358781.1-202ENST00000321081 1360 ntBASIC18.22■□□□□ 0.51
USP6P35125 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 AL596257.1-201ENST00000641463 2694 ntBASIC18.22■□□□□ 0.51
USP6P35125 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC18.22■□□□□ 0.51
USP6P35125 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 MIR339-201ENST00000362153 94 ntBASIC18.22■□□□□ 0.51
USP6P35125 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP6P35125 AL121994.1-201ENST00000413189 402 ntBASIC18.22■□□□□ 0.51
USP6P35125 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.22■□□□□ 0.51
USP6P35125 YBX1P3-201ENST00000468366 909 ntBASIC18.22■□□□□ 0.51
USP6P35125 OR52V1P-201ENST00000515557 898 ntBASIC18.22■□□□□ 0.51
USP6P35125 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC18.22■□□□□ 0.51
USP6P35125 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC18.22■□□□□ 0.51
USP6P35125 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC18.22■□□□□ 0.51
USP6P35125 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC18.22■□□□□ 0.51
USP6P35125 AC092535.4-201ENST00000609548 397 ntBASIC18.22■□□□□ 0.51
USP6P35125 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC18.22■□□□□ 0.51
USP6P35125 AC005865.2-202ENST00000635814 725 ntBASIC18.22■□□□□ 0.51
USP6P35125 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC18.22■□□□□ 0.51
USP6P35125 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.22■□□□□ 0.51
USP6P35125 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
USP6P35125 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 AC023794.5-201ENST00000564380 2157 ntBASIC18.21■□□□□ 0.51
USP6P35125 FAM45BP-202ENST00000592932 1624 ntBASIC18.21■□□□□ 0.51
USP6P35125 AL008638.4-201ENST00000624792 1315 ntBASIC18.21■□□□□ 0.51
USP6P35125 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP6P35125 OR2T32P-201ENST00000403423 963 ntBASIC18.21■□□□□ 0.51
USP6P35125 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC18.21■□□□□ 0.51
USP6P35125 FTH1P18-201ENST00000412071 549 ntBASIC18.21■□□□□ 0.51
USP6P35125 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 OR4C14P-201ENST00000440929 923 ntBASIC18.21■□□□□ 0.51
USP6P35125 UGT1A12P-201ENST00000447084 853 ntBASIC18.21■□□□□ 0.51
USP6P35125 RN7SL646P-201ENST00000492969 297 ntBASIC18.21■□□□□ 0.51
USP6P35125 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP6P35125 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP6P35125 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6P35125 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
USP6P35125 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
USP6P35125 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 Z97653.2-201ENST00000623057 1418 ntBASIC18.2■□□□□ 0.5
USP6P35125 POM121L4P-202ENST00000427789 1891 ntBASIC18.2■□□□□ 0.5
USP6P35125 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6P35125 AC072061.1-201ENST00000569710 2234 ntBASIC18.2■□□□□ 0.5
USP6P35125 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 AC135506.1-201ENST00000603877 1799 ntBASIC18.2■□□□□ 0.5
USP6P35125 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6P35125 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6P35125 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6P35125 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
USP6P35125 TUBB2BP1-201ENST00000404155 871 ntBASIC18.2■□□□□ 0.5
USP6P35125 HNRNPA1P25-201ENST00000422644 937 ntBASIC18.2■□□□□ 0.5
USP6P35125 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6P35125 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms