Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
RAB4AP20338 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB4AP20338 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB4AP20338 GUCY2EP-203ENST00000531117 1918 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB4AP20338 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 AC040169.1-201ENST00000565382 521 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 DUX4L47-201ENST00000566374 394 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
RAB4AP20338 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB4AP20338 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB4AP20338 AC009078.3-201ENST00000624205 4084 ntBASIC10.71□□□□□ -0.7
RAB4AP20338 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB4AP20338 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
RAB4AP20338 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB4AP20338 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 AL138799.1-201ENST00000448213 1675 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 IL9RP2-201ENST00000423948 1312 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RAB4AP20338 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 MIR1224-201ENST00000408193 85 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 TLE1P1-201ENST00000422965 589 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 NUS1P3-201ENST00000423502 862 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB4AP20338 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB4AP20338 SDHAP3-202ENST00000515467 728 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RAB4AP20338 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.7□□□□□ -0.7
RAB4AP20338 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 AL109936.8-201ENST00000641772 604 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
RAB4AP20338 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 AC004494.1-201ENST00000613210 2775 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RAB4AP20338 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB4AP20338 SHC1P1-201ENST00000425230 1745 ntBASIC10.7□□□□□ -0.7
RAB4AP20338 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RAB4AP20338 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RAB4AP20338 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
RAB4AP20338 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB4AP20338 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB4AP20338 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB4AP20338 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RAB4AP20338 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB4AP20338 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms