Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.3□□□□□ -0.28
BCKDHAP12694 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.3□□□□□ -0.28
BCKDHAP12694 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.3□□□□□ -0.28
BCKDHAP12694 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.3□□□□□ -0.28
BCKDHAP12694 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.3□□□□□ -0.28
BCKDHAP12694 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 ALG1L13P-202ENST00000519320 584 ntBASIC13.3□□□□□ -0.28
BCKDHAP12694 AC044849.1-201ENST00000519737 1188 ntBASIC13.3□□□□□ -0.28
BCKDHAP12694 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 AC239800.4-201ENST00000603712 296 ntBASIC13.3□□□□□ -0.28
BCKDHAP12694 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.3□□□□□ -0.28
BCKDHAP12694 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.3□□□□□ -0.28
BCKDHAP12694 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.3□□□□□ -0.28
BCKDHAP12694 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BCKDHAP12694 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
BCKDHAP12694 NRADDP-202ENST00000641269 1585 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
BCKDHAP12694 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.29□□□□□ -0.28
BCKDHAP12694 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 TNRC18P1-201ENST00000502875 3650 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AC125604.1-201ENST00000496255 707 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.29□□□□□ -0.28
BCKDHAP12694 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.29□□□□□ -0.28
BCKDHAP12694 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.29□□□□□ -0.28
BCKDHAP12694 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 AL021707.6-201ENST00000609212 491 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 TUBB1P2-201ENST00000422712 1306 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 TUBB1P1-201ENST00000503144 1300 ntBASIC13.29□□□□□ -0.28
BCKDHAP12694 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.29□□□□□ -0.28
BCKDHAP12694 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BCKDHAP12694 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.29□□□□□ -0.28
BCKDHAP12694 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BCKDHAP12694 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BCKDHAP12694 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BCKDHAP12694 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
BCKDHAP12694 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BCKDHAP12694 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BCKDHAP12694 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.28□□□□□ -0.28
BCKDHAP12694 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 AC102953.2-201ENST00000609755 3026 ntBASIC13.28□□□□□ -0.28
BCKDHAP12694 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BCKDHAP12694 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BCKDHAP12694 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BCKDHAP12694 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms