Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.77□□□□□ -0.21
COL6A2P12110 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.77□□□□□ -0.21
COL6A2P12110 SLC25A15P3-201ENST00000505530 290 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 AC106794.1-201ENST00000506935 792 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 RNA5SP412-201ENST00000516234 123 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.77□□□□□ -0.21
COL6A2P12110 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.77□□□□□ -0.21
COL6A2P12110 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.77□□□□□ -0.21
COL6A2P12110 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.77□□□□□ -0.21
COL6A2P12110 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.77□□□□□ -0.21
COL6A2P12110 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.77□□□□□ -0.21
COL6A2P12110 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 AC007663.3-201ENST00000609632 465 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.77□□□□□ -0.21
COL6A2P12110 AL096828.3-201ENST00000615354 462 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 AC063926.2-201ENST00000623766 1308 ntBASIC13.77□□□□□ -0.21
COL6A2P12110 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.77□□□□□ -0.21
COL6A2P12110 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
COL6A2P12110 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL6A2P12110 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A2P12110 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 NRADDP-202ENST00000641269 1585 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
COL6A2P12110 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 DPM3-202ENST00000368399 517 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.76□□□□□ -0.21
COL6A2P12110 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 AC244107.1-201ENST00000442033 332 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 GAPDHP21-201ENST00000450301 1010 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 AC104073.2-201ENST00000453737 312 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 KRT8P1-201ENST00000557533 1207 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 AP003969.2-201ENST00000623739 2275 ntBASIC13.76□□□□□ -0.21
COL6A2P12110 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.76□□□□□ -0.21
COL6A2P12110 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL6A2P12110 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.76□□□□□ -0.21
COL6A2P12110 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.75□□□□□ -0.21
COL6A2P12110 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
COL6A2P12110 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms