Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.6□□□□□ -0.39
FREM3P0C091 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.6□□□□□ -0.39
FREM3P0C091 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 LINC00634-202ENST00000505157 222 ntBASIC12.6□□□□□ -0.39
FREM3P0C091 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.6□□□□□ -0.39
FREM3P0C091 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 AL118522.1-201ENST00000611368 560 ntBASIC12.6□□□□□ -0.39
FREM3P0C091 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
FREM3P0C091 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
FREM3P0C091 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FREM3P0C091 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.6□□□□□ -0.39
FREM3P0C091 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
FREM3P0C091 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 AL592076.1-201ENST00000424448 303 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 AK2P2-201ENST00000439142 405 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.59□□□□□ -0.39
FREM3P0C091 RN7SL767P-201ENST00000493013 295 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.59□□□□□ -0.39
FREM3P0C091 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.59□□□□□ -0.39
FREM3P0C091 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
FREM3P0C091 AL049840.2-201ENST00000602722 535 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 AC020763.3-201ENST00000625095 2904 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.59□□□□□ -0.39
FREM3P0C091 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 KRT8P18-201ENST00000413425 1445 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 MEX3B-202ENST00000558133 4333 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 RN7SL564P-201ENST00000496309 250 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms